Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015842971.1_cds_XP_016508557.1_21567
CDS Infomation

[gene=LOC107826122] [db_xref=GeneID:107826122] [protein=patatin-like protein 2] [protein_id=XP_016508557.1] [location=join(7971..8117,8673..8854,8938..9130,10041..10202,10922..11224,12146..12321,12442..12517)] [gbkey=CDS]
Sequence

ATGGAGAAGGCAATATCATCATGTGGTTCTTTAAAGCTGCAGCCTCCAACTTATGGTAAA
CTCATAACCATTCTCAGCATCGATGGAGGTGGAATTAGGGGAATAATTCCTGCTACTATT
CTTGAGTATCTTGAATCTCAACTCCAGGAATTGGATGGTGAGGATGCCAGGCTTGCAGAT
TACTTCGATATAATTGCAGGAACAAGCACAGGAGGTCTTGTCACGGCCATGCTAACAGCT
CCAGACAAAGACAAGCGTCCTTTATTTGCTGCTAAAGACATAAAACCCTTCTATCTTGAA
CATGGCCCTAAGATATTTCCACAGAAGAAATCGATGATACTGTTTGGATCAGTAATGAAG
ACCTTGAAATCTCTTATGGGACCAAAGTATAATGGGAAGTATCTTCACCAAGTTATAGAG
GAGAAATTAGGAGAGACTCAGTTACATGAGACATTGACTAATGTGGTTATTCCAACTTTT
GATATCAAGAATTTACAACCAAAAGTTTTCTCCACTTTTGAGGCCAGAGAAAAACCACTA
ATGGATGCTAAGCTTTCAGATATATGCGCCAGTACATCTGCAGCTCCAACGTATCTTCCT
GCACATTATTTTCAGACTCAAGACAAAGATGGCAACTTTCATGAATTCAATCTTGTTGAT
GGTGGAGTCGCAGCTAACAATCCAGCCCTTGTTGCTACAAGCCAAGTGACCCAACAAATA
ATGACCGGAAACCCAGATTTCTTTCCAATCAAGCCCATTGATTATGGAAGATTTTTGGTG
ATATCTATAGGCACTGGATCAGCAAAAGTGGAACAGAAATATAATGCTAAAATTGCATCC
AAATGGGGTATCTTGGGTTGGCTTCTTAATGGAGGTTCAACTCCAATTGTGGATGTTTTT
ACTCAAGCCAGTGGTGATATGGTTGATCTTCATATTTCTGTTGTCTTCCAAGCTCTTCAT
TCTGAAGAAAATTACCTTCGTATTCAGGATGACACATTAACTGGAACAGACTCCTCCGTT
GATATAGCAACCAAAGAGAACATGGACAAATTGGTTGAAATAGGGAAAAGTTTATTGAAG
AAACCAGTTTCAAGGGTAAATCTGCAGACAGGTCTATCTGAACAATGCAAAAATGGTGGC
ACAAATGAAGAAACTTTGAAAAGGTTTGCGAAGTTACTTTCAGAAGAAAAAAGACTCAGG
GATTTCAAGTCACCTCATACAAACAAAACCTCAGAGTAG

Peptide Sequence

PEP ID

XP_016508557.1
PEP Infomation

PREDICTED: patatin-like protein 2 [Nicotiana tabacum]
Sequence

MEKAISSCGSLKLQPPTYGKLITILSIDGGGIRGIIPATILEYLESQLQELDGEDARLAD
YFDIIAGTSTGGLVTAMLTAPDKDKRPLFAAKDIKPFYLEHGPKIFPQKKSMILFGSVMK
TLKSLMGPKYNGKYLHQVIEEKLGETQLHETLTNVVIPTFDIKNLQPKVFSTFEAREKPL
MDAKLSDICASTSAAPTYLPAHYFQTQDKDGNFHEFNLVDGGVAANNPALVATSQVTQQI
MTGNPDFFPIKPIDYGRFLVISIGTGSAKVEQKYNAKIASKWGILGWLLNGGSTPIVDVF
TQASGDMVDLHISVVFQALHSEENYLRIQDDTLTGTDSSVDIATKENMDKLVEIGKSLLK
KPVSRVNLQTGLSEQCKNGGTNEETLKRFAKLLSEEKRLRDFKSPHTNKTSE

Transcript Sequence

Gene sequence data has not been registered.